sklearn.cluster
.MiniBatchKMeans¶

class
sklearn.cluster.
MiniBatchKMeans
(n_clusters=8, *, init='kmeans++', max_iter=100, batch_size=100, verbose=0, compute_labels=True, random_state=None, tol=0.0, max_no_improvement=10, init_size=None, n_init=3, reassignment_ratio=0.01)[source]¶ MiniBatch KMeans clustering.
Read more in the User Guide.
 Parameters
 n_clustersint, default=8
The number of clusters to form as well as the number of centroids to generate.
 init{‘kmeans++’, ‘random’} or ndarray of shape (n_clusters, n_features), default=’kmeans++’
Method for initialization
‘kmeans++’ : selects initial cluster centers for kmean clustering in a smart way to speed up convergence. See section Notes in k_init for more details.
‘random’: choose k observations (rows) at random from data for the initial centroids.
If an ndarray is passed, it should be of shape (n_clusters, n_features) and gives the initial centers.
 max_iterint, default=100
Maximum number of iterations over the complete dataset before stopping independently of any early stopping criterion heuristics.
 batch_sizeint, default=100
Size of the mini batches.
 verboseint, default=0
Verbosity mode.
 compute_labelsbool, default=True
Compute label assignment and inertia for the complete dataset once the minibatch optimization has converged in fit.
 random_stateint, RandomState instance, default=None
Determines random number generation for centroid initialization and random reassignment. Use an int to make the randomness deterministic. See Glossary.
 tolfloat, default=0.0
Control early stopping based on the relative center changes as measured by a smoothed, variancenormalized of the mean center squared position changes. This early stopping heuristics is closer to the one used for the batch variant of the algorithms but induces a slight computational and memory overhead over the inertia heuristic.
To disable convergence detection based on normalized center change, set tol to 0.0 (default).
 max_no_improvementint, default=10
Control early stopping based on the consecutive number of mini batches that does not yield an improvement on the smoothed inertia.
To disable convergence detection based on inertia, set max_no_improvement to None.
 init_sizeint, default=None
Number of samples to randomly sample for speeding up the initialization (sometimes at the expense of accuracy): the only algorithm is initialized by running a batch KMeans on a random subset of the data. This needs to be larger than n_clusters.
If
None
,init_size= 3 * batch_size
. n_initint, default=3
Number of random initializations that are tried. In contrast to KMeans, the algorithm is only run once, using the best of the
n_init
initializations as measured by inertia. reassignment_ratiofloat, default=0.01
Control the fraction of the maximum number of counts for a center to be reassigned. A higher value means that low count centers are more easily reassigned, which means that the model will take longer to converge, but should converge in a better clustering.
 Attributes
 cluster_centers_ndarray of shape (n_clusters, n_features)
Coordinates of cluster centers
 labels_int
Labels of each point (if compute_labels is set to True).
 inertia_float
The value of the inertia criterion associated with the chosen partition (if compute_labels is set to True). The inertia is defined as the sum of square distances of samples to their nearest neighbor.
See also
KMeans
The classic implementation of the clustering method based on the Lloyd’s algorithm. It consumes the whole set of input data at each iteration.
Notes
See https://www.eecs.tufts.edu/~dsculley/papers/fastkmeans.pdf
Examples
>>> from sklearn.cluster import MiniBatchKMeans >>> import numpy as np >>> X = np.array([[1, 2], [1, 4], [1, 0], ... [4, 2], [4, 0], [4, 4], ... [4, 5], [0, 1], [2, 2], ... [3, 2], [5, 5], [1, 1]]) >>> # manually fit on batches >>> kmeans = MiniBatchKMeans(n_clusters=2, ... random_state=0, ... batch_size=6) >>> kmeans = kmeans.partial_fit(X[0:6,:]) >>> kmeans = kmeans.partial_fit(X[6:12,:]) >>> kmeans.cluster_centers_ array([[2. , 1. ], [3.5, 4.5]]) >>> kmeans.predict([[0, 0], [4, 4]]) array([0, 1], dtype=int32) >>> # fit on the whole data >>> kmeans = MiniBatchKMeans(n_clusters=2, ... random_state=0, ... batch_size=6, ... max_iter=10).fit(X) >>> kmeans.cluster_centers_ array([[3.95918367, 2.40816327], [1.12195122, 1.3902439 ]]) >>> kmeans.predict([[0, 0], [4, 4]]) array([1, 0], dtype=int32)
Methods
fit
(X[, y, sample_weight])Compute the centroids on X by chunking it into minibatches.
fit_predict
(X[, y, sample_weight])Compute cluster centers and predict cluster index for each sample.
fit_transform
(X[, y, sample_weight])Compute clustering and transform X to clusterdistance space.
get_params
([deep])Get parameters for this estimator.
partial_fit
(X[, y, sample_weight])Update k means estimate on a single minibatch X.
predict
(X[, sample_weight])Predict the closest cluster each sample in X belongs to.
score
(X[, y, sample_weight])Opposite of the value of X on the Kmeans objective.
set_params
(**params)Set the parameters of this estimator.
transform
(X)Transform X to a clusterdistance space.

__init__
(n_clusters=8, *, init='kmeans++', max_iter=100, batch_size=100, verbose=0, compute_labels=True, random_state=None, tol=0.0, max_no_improvement=10, init_size=None, n_init=3, reassignment_ratio=0.01)[source]¶ Initialize self. See help(type(self)) for accurate signature.

fit
(X, y=None, sample_weight=None)[source]¶ Compute the centroids on X by chunking it into minibatches.
 Parameters
 Xarraylike or sparse matrix, shape=(n_samples, n_features)
Training instances to cluster. It must be noted that the data will be converted to C ordering, which will cause a memory copy if the given data is not Ccontiguous.
 yIgnored
Not used, present here for API consistency by convention.
 sample_weightarraylike, shape (n_samples,), optional
The weights for each observation in X. If None, all observations are assigned equal weight (default: None).
New in version 0.20.
 Returns
 self

fit_predict
(X, y=None, sample_weight=None)[source]¶ Compute cluster centers and predict cluster index for each sample.
Convenience method; equivalent to calling fit(X) followed by predict(X).
 Parameters
 X{arraylike, sparse matrix} of shape (n_samples, n_features)
New data to transform.
 yIgnored
Not used, present here for API consistency by convention.
 sample_weightarraylike of shape (n_samples,), default=None
The weights for each observation in X. If None, all observations are assigned equal weight.
 Returns
 labelsndarray of shape (n_samples,)
Index of the cluster each sample belongs to.

fit_transform
(X, y=None, sample_weight=None)[source]¶ Compute clustering and transform X to clusterdistance space.
Equivalent to fit(X).transform(X), but more efficiently implemented.
 Parameters
 X{arraylike, sparse matrix} of shape (n_samples, n_features)
New data to transform.
 yIgnored
Not used, present here for API consistency by convention.
 sample_weightarraylike of shape (n_samples,), default=None
The weights for each observation in X. If None, all observations are assigned equal weight.
 Returns
 X_newarray of shape (n_samples, n_clusters)
X transformed in the new space.

get_params
(deep=True)[source]¶ Get parameters for this estimator.
 Parameters
 deepbool, default=True
If True, will return the parameters for this estimator and contained subobjects that are estimators.
 Returns
 paramsmapping of string to any
Parameter names mapped to their values.

partial_fit
(X, y=None, sample_weight=None)[source]¶ Update k means estimate on a single minibatch X.
 Parameters
 Xarraylike of shape (n_samples, n_features)
Coordinates of the data points to cluster. It must be noted that X will be copied if it is not Ccontiguous.
 yIgnored
Not used, present here for API consistency by convention.
 sample_weightarraylike, shape (n_samples,), optional
The weights for each observation in X. If None, all observations are assigned equal weight (default: None).
 Returns
 self

predict
(X, sample_weight=None)[source]¶ Predict the closest cluster each sample in X belongs to.
In the vector quantization literature,
cluster_centers_
is called the code book and each value returned bypredict
is the index of the closest code in the code book. Parameters
 X{arraylike, sparse matrix} of shape (n_samples, n_features)
New data to predict.
 sample_weightarraylike, shape (n_samples,), optional
The weights for each observation in X. If None, all observations are assigned equal weight (default: None).
 Returns
 labelsarray, shape [n_samples,]
Index of the cluster each sample belongs to.

score
(X, y=None, sample_weight=None)[source]¶ Opposite of the value of X on the Kmeans objective.
 Parameters
 X{arraylike, sparse matrix} of shape (n_samples, n_features)
New data.
 yIgnored
Not used, present here for API consistency by convention.
 sample_weightarraylike of shape (n_samples,), default=None
The weights for each observation in X. If None, all observations are assigned equal weight.
 Returns
 scorefloat
Opposite of the value of X on the Kmeans objective.

set_params
(**params)[source]¶ Set the parameters of this estimator.
The method works on simple estimators as well as on nested objects (such as pipelines). The latter have parameters of the form
<component>__<parameter>
so that it’s possible to update each component of a nested object. Parameters
 **paramsdict
Estimator parameters.
 Returns
 selfobject
Estimator instance.

transform
(X)[source]¶ Transform X to a clusterdistance space.
In the new space, each dimension is the distance to the cluster centers. Note that even if X is sparse, the array returned by
transform
will typically be dense. Parameters
 X{arraylike, sparse matrix} of shape (n_samples, n_features)
New data to transform.
 Returns
 X_newndarray of shape (n_samples, n_clusters)
X transformed in the new space.