sklearn.neighbors.radius_neighbors_graph¶
- sklearn.neighbors.radius_neighbors_graph(X, radius, mode='connectivity', metric='minkowski', p=2, metric_params=None, include_self=None)[source]¶
Computes the (weighted) graph of Neighbors for points in X
Neighborhoods are restricted the points at a distance lower than radius.
Parameters: X : array-like or BallTree, shape = [n_samples, n_features]
Sample data, in the form of a numpy array or a precomputed BallTree.
radius : float
Radius of neighborhoods.
mode : {‘connectivity’, ‘distance’}, optional
Type of returned matrix: ‘connectivity’ will return the connectivity matrix with ones and zeros, in ‘distance’ the edges are Euclidean distance between points.
metric : string, default ‘minkowski’
The distance metric used to calculate the neighbors within a given radius for each sample point. The DistanceMetric class gives a list of available metrics. The default distance is ‘euclidean’ (‘minkowski’ metric with the param equal to 2.)
include_self: bool, default None :
Whether or not to mark each sample as the first nearest neighbor to itself. If None, then True is used for mode=’connectivity’ and False for mode=’distance’ as this will preserve backwards compatibilty. From version 0.18, the default value will be False, irrespective of the value of mode.
p : int, default 2
Power parameter for the Minkowski metric. When p = 1, this is equivalent to using manhattan_distance (l1), and euclidean_distance (l2) for p = 2. For arbitrary p, minkowski_distance (l_p) is used.
metric_params: dict, optional :
additional keyword arguments for the metric function.
Returns: A : sparse matrix in CSR format, shape = [n_samples, n_samples]
A[i, j] is assigned the weight of edge that connects i to j.
See also
Examples
>>> X = [[0], [3], [1]] >>> from sklearn.neighbors import radius_neighbors_graph >>> A = radius_neighbors_graph(X, 1.5) >>> A.toarray() array([[ 1., 0., 1.], [ 0., 1., 0.], [ 1., 0., 1.]])